Migrating from JRCLUST v3

What’s different

• Variable and parameter names have changed.
• The input and output file names have changed.
• A probe file is no longer required, but may be used.
• vcFile and csFile_merge are now a single parameter, rawRecordings.
• Some commands are missing.
• Logging and curation history are stored in the DensityPeakClustering object hClust, instead of in a separate file where they might get out of sync.
• You must specify your parameter file for every invocation of JRCLUST.
• JRCLUST will overwrite old config files and save a backup copy to ‘filename.prm.bak’.

Note

Old sortings must be manually imported with jrc importv3 mysession_jrc.mat. This will output ‘mysession_res.mat’ and update your config file. (A backup will be made of your config file at ‘mysession.prm.bak’.) Additionally, your ‘_spkraw.jrc’, ‘_spkwav.jrc’, and ‘_spkfet.jrc’ will be renamed to ‘_raw.jrc’, ‘_filt.jrc’, and ‘_features.jrc’, respectively. Nothing will be altered except for this renaming.